BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014D06SP1|AL426680
(801 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1257 1580 0.0
>3x_Contig1257
Length = 4889
Score = 1580 bits (797), Expect = 0.0
Identities = 800/801 (99%)
Strand = Plus / Minus
Query: 1 attatgttattagatcctactgggacaccattcgctccagtaccagcagacataggtcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4789 attatgttattagatcctactgggacaccattcgctccagtaccagcagacataggtcca 4730
Query: 61 ccagtttgtggagtgtttacaaacggcgatccaactaacagatgactcggcaacagtgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4729 ccagtttgtggagtgtttacaaacggcgatccaactaacagatgactcggcaacagtgta 4670
Query: 121 atcccataaacaggatcaaatggagtctgaggaatactaactgttccaggaatacttcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4669 atcccataaacaggatcaaatggagtctgaggaatactaactgttccaggaatacttcct 4610
Query: 181 ggtatagaacctggcatagaaccaccacgatgtgtgtaatttatatactgcggtggatgg 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4609 ggtatagaacctggcatagaaccaccacgatgtgtgtaatatatatactgcggtggatgg 4550
Query: 241 tgattcgatccaccatttcttcctgccacatcgtagacctgttgttcgtaaccaacaggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4549 tgattcgatccaccatttcttcctgccacatcgtagacctgttgttcgtaaccaacaggc 4490
Query: 301 ggtctcccatatatcagagaaggctgataatgattagccgatgttcccgaattcattggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4489 ggtctcccatatatcagagaaggctgataatgattagccgatgttcccgaattcattggg 4430
Query: 361 tttatgtatgcacggtttgtttcttcttcaacgtttcaaattctttaattccacaaacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4429 tttatgtatgcacggtttgtttcttcttcaacgtttcaaattctttaattccacaaacat 4370
Query: 421 tcaactcccctcaacaatgctgccaaaaataatgcgatgtactattatcttgttatccac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4369 tcaactcccctcaacaatgctgccaaaaataatgcgatgtactattatcttgttatccac 4310
Query: 481 aattgtagaacaccaaatatccgaatcgttggaaatcttgactttaattcttcctcaatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4309 aattgtagaacaccaaatatccgaatcgttggaaatcttgactttaattcttcctcaatc 4250
Query: 541 agaagtacccacaacacaaacaaaggatgttgatctctgtgactcgaaaagcacgattgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4249 agaagtacccacaacacaaacaaaggatgttgatctctgtgactcgaaaagcacgattgc 4190
Query: 601 tatacagaaaaaaaaaggtaaaaagtgcttcactgaacgcttattcctaaagagaaaccg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4189 tatacagaaaaaaaaaggtaaaaagtgcttcactgaacgcttattcctaaagagaaaccg 4130
Query: 661 agaaatttcagaacgggatgtgatgataacagtaaaacgagtactattgctacaattgtc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4129 agaaatttcagaacgggatgtgatgataacagtaaaacgagtactattgctacaattgtc 4070
Query: 721 tttgctacttcacttcacttgtactaataataaatcaccggtcctaaaaaaagataccaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4069 tttgctacttcacttcacttgtactaataataaatcaccggtcctaaaaaaagataccaa 4010
Query: 781 tttaaacaaacagtattccga 801
|||||||||||||||||||||
Sbjct: 4009 tttaaacaaacagtattccga 3989
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6601
Number of Sequences: 1807
Number of extensions: 6601
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 801
length of database: 10,358,551
effective HSP length: 16
effective length of query: 785
effective length of database: 10,329,639
effective search space: 8108766615
effective search space used: 8108766615
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)